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Volume 11, Number 12—December 2005
Research

Intergenogroup Recombination in Sapoviruses

Grant S. Hansman*, Naokazu Takeda*, Tomoichiro Oka*, Mitsukai Oseto†, Kjell-Olof Hedlund‡, and Kazuhiko Katayama*Comments to Author 
Author affiliations: *National Institute of Infectious Diseases, Tokyo, Japan; †National Institute of Environmental Studies, Ehime, Japan; ‡Swedish Institute for Infectious Disease Control, Solna, Sweden

Main Article

Table

Nucleotide identity (%) among sapovirus strains*

Nonstructural region Structural region
Ehime1107 SW278 Mc2 Mc10 C12 SK15 Dresden Manchester NK24 PEC
Ehime1107 96.9 54.6 55.1 54.4 55.2 58.3 58.8 58.3 51.0
SW278 97.5 54.6 55.2 54.0 54.7 58.1 58.3 58.3 50.8
Mc2 73.8 74.0 72.7 73.0 71.8 54.5 54.0 53.7 51.2
Mc10 77.5 77.6 74.4 71.5 71.1 55.3 54.6 55.2 50.7
C12 77.3 77.3 74.4 90.1 75.0 55.4 55.7 55.5 51.8
SK15 77.5 77.5 73.3 81.0 80.3 56.2 56.1 55.5 50.4
Dresden 62.6 62.7 63.3 63.0 63.1 62.4 92.9 57.3 52.5
Manchester 63.5 63.3 63.2 63.7 64.0 62.8 90.5 57.4 52.1
NK24 55.4 55.6 55.8 55.7 55.0 55.2 56.3 56.8 53.3
PEC 52.5 52.5 53.0 52.3 52.4 52.3 51.7 51.5 52.1

*Values on the lower left represent the nonstructural region, i.e., genome start to capsid start; values on the upper right represent the structural region, i.e., capsid start to genome end.

Main Article

Page created: February 02, 2012
Page updated: February 02, 2012
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