Novel Orthobunyavirus in Cattle, Europe, 2011
Bernd Hoffmann
1, Matthias Scheuch
1, Dirk Höper, Ralf Jungblut, Mark Holsteg, Horst Schirrmeier, Michael Eschbaumer, Katja V. Goller, Kerstin Wernike, Melina Fischer, Angele Breithaupt, Thomas C. Mettenleiter, and Martin Beer
Author affiliations: Friedrich-Loeffler-Institut, Greifswald–Insel Riems, Germany (B. Hoffmann, M. Scheuch, D. Höper, H. Schirrmeier, M. Eschbaumer, K.V. Goller, K. Wernike, M. Fischer, A. Breithaupt, T.C. Mettenleiter, M. Beer); State Veterinary Diagnostic Laboratory, Arnsberg, Germany (R. Jungblut); Chamber of Agriculture for North Rhine-Westphalia, Bovine Health Service, Bonn, Germany (M. Holsteg)
Main Article
Table
Output of raw sequence data for the sequencing libraries in the analysis of a novel orthobunyavirus in cattle, Europe, 2011
Sample |
Total no. reads |
No. reads classified into superkingdom
|
No. unclassified reads |
Eukaryota |
Archaea |
Bacteria |
Viruses |
Root |
BH 80/11 RNA (3 pooled samples) |
27,413 |
12,296 |
4 |
13,363 |
55 (Myoviridae, Siphoviridae, Podoviridae, Bunyaviridae, Retroviridae, Papillomaviridae) |
377 |
1,318 |
BH 81/11 RNA |
16,125 |
10,220 |
2 |
4,821 |
57 (Myoviridae, Siphoviridae, Podoviridae, Retroviridae) |
19 |
1,006 |
BH 80/11 DNA (3 pooled samples) |
77,929 |
59,308 |
3 |
95 |
3 (Herpesviridae, Mimiviridae, unclassified virus) |
9,181 |
9,339 |
BH 81/11 DNA |
89,728 |
79,742 |
9 |
44 |
1 (Retroviridae) |
3 |
9,929 |
Main Article
Page created: February 16, 2012
Page updated: February 16, 2012
Page reviewed: February 16, 2012
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