Volume 20, Number 6—June 2014
Research
Genetic Evidence of Importation of Drug-Resistant Plasmodium falciparum to Guatemala from the Democratic Republic of the Congo
Table
Neutral microsatellite loci and primer sequences used for PCR amplification of Plasmodium falciparum malaria genes to identify origin of drug-resistant genotype, Guatemala
Locus name |
Chromosome |
Primer |
Primer sequence (5′→3′) |
Tag |
Expected product size, bp |
C2M33 | 2 | Forward | CATTGCAAAATATATATTCTCC | FAM | 193 |
Reverse | GTGATTTGTACAATGTACATA | ||||
Heminested |
ATTGCGTAAATAACACATCTGCA |
||||
C3M88* | 3 | Forward | CAAAAATGAAAAATGAAAAGG | HEX | 150 |
Reverse | TAAAGGGTGCGCATATCAAT | ||||
Heminested |
GTTATTCAAAAAGGACGAAACAAG |
||||
C3M69 | 3 | Forward | AATAGGAACAAATCATATTG | HEX | 173 |
Reverse | AGATATCCAGGTAATAAAAAG | ||||
Heminested |
TTTATGAACACCCTCATGTCACT |
||||
C2M29 | 2 | Forward | GTGAATAACGGAAAAGGATA | FAM | 141 |
Reverse | AAGATCAAATACCAGGTGA | ||||
Heminested |
TTAAGAAACAATCAGAAGCGATG |
||||
C2M27 | 2 | Forward | CTTTTAATCACTACCATGTTG | HEX | 117 |
Reverse | ATAATTTAATTGAGGATACCT | ||||
Heminested |
TTGTATGTATCACTTTTTCATTAC |
||||
C3M40 | 3 | Forward | GGGTAAAGAAAAACACACAAA | FAM | 128 |
Reverse | AATGTGTATATTACTAGAAGC | ||||
Heminested |
TCCGAATATGGAATGTCGAAAG |
||||
C3M39 | 3 | Forward | CAAGAAGATAGGGATGATAAC | FAM | 159 |
Reverse | TATTAATTGGTCTTCACCCG | ||||
Heminested |
GGAGGAACGTAAAGAAGATATTG |
||||
C2M34 | 2 | Forward | TCCCTTTTAAAATAGAAGAAA | FAM | 260 |
Reverse | GATTATATGAAAGGATACATG | ||||
Heminested | TTCACTTTGTAAATTAGAACATATC |
*Censored locus caused by poor amplification success.