Volume 22, Number 8—August 2016
Research
Phylogeographic Evidence for 2 Genetically Distinct Zoonotic Plasmodium knowlesi Parasites, Malaysia
Table 2
Samples and sequences obtained for the PkCOX1 gene used to distinguish the 2 distinct Plasmodium knowlesi parasite populations in Malaysia*
Location | No. sequences |
Total sequences obtained | |||||||
---|---|---|---|---|---|---|---|---|---|
No. samples† |
Human |
Macaque |
|||||||
Human | Macaque | This study‡ | GenBank§ | This study‡ | GenBank§ | ||||
Peninsular Malaysia | |||||||||
Kelantan | 13 | ND | 15 | ND | ND | ND | 15 | ||
Johor | 3 | ND | 4 | ND | ND | ND | 4 | ||
Selangor | 7 | 5 | 5 | ND | 5 | 1 | 11 | ||
Terengganu | 2 | ND | 1 | ND | 0 | ND | 1 | ||
Pahang | 14 | 1 | 18 | ND | 2 | 1 | 21 | ||
Negeri Sembilan |
4 |
2 |
ND |
1 |
1 |
ND |
2 |
||
Malaysian Borneo | |||||||||
Sarawak | 22 | ND | 23 | 21 | ND | 22 | 66 | ||
Sabah |
13 |
ND |
18 |
ND |
ND |
ND |
18 |
||
Total samples | NA | 86 | 78 | 22 | 8 | 12 | 100 human + 20 macaque | ||
Total sequences | NA | NA | 84 | 22 | 8 | 24 | 106 human + 32 macaque |
*NA, not applicable; ND, no data; PkCOX1 P. knowlesi cytochrome oxidase subunit I.
†Previously collected samples used for this study.
‡GenBank accession nos.KT900705–KT900797).
§GenBank accession numbers listed in online Technical Appendix Table (http://wwwnc.cdc.gov/EID/article/22/8/15-1885-Techapp1.pdf).
1These authors contributed equally to this article.