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Volume 24, Number 12—December 2018
Research

Rat Hepatitis E Virus as Cause of Persistent Hepatitis after Liver Transplant

Siddharth Sridhar, Cyril C.Y. Yip, Shusheng Wu, Jianpiao Cai, Anna Jin-Xia Zhang, Kit-Hang Leung, Tom W.H. Chung, Jasper F.W. Chan, Wan-Mui Chan, Jade L.L. Teng, Rex K.H. Au-Yeung, Vincent C.C. Cheng, Honglin Chen, Susanna K.P. Lau, Patrick C.Y. Woo, Ning-Shao Xia, Chung-Mau Lo, and Kwok-Yung YuenComments to Author 
Author affiliations: The University of Hong Kong, Hong Kong, China (S. Sridhar, C.C.Y. Yip, S. Wu, J. Cai, A.J.-X. Zhang, K.-H. Leung, T.W.H. Chung, J.F.W. Chan, W.-M. Chan, J.L.L. Teng, R.K.H. Au-Yeung, V.C.C. Cheng, H. Chen, S.K.P. Lau, P.C.Y. Woo, C.-M. Lo, K.-Y. Yuen); The University of Hong Kong–Shenzhen Hospital, Shenzhen, China (J.F.W. Chan, C.-M. Lo, K.-Y. Yuen); Xiamen University, Xiamen, China (N.-S. Xia)

Main Article

Table 2

Comparison between nucleotide and deduced amino acid sequence identities of HEV strain LCK-3110 and other HEV strains

HEV strain (GenBank accession no.)
HEV species
Rat HEV strain LCK-3110
Entire genome
Nucleotides, %

Amino acids, %
ORF1
ORF2
ORF3
ORF1
ORF2
ORF3
Genotype 1 (NC_001434) HEV-A 57.6 56.4 60.9 55.0 50.0 56.3 31.0
Genotype 2 (M74506) HEV-A 57.3 56.3 60.0 50.4 49.7 56.1 27.6
Genotype 3 (EU723512) HEV-A 56.6 55.4 60.7 51.9 50.3 56.5 30.7
Genotype 4 (AJ272108) HEV-A 56.5 55.4 59.8 55.4 49.7 56.4 31.0
Rabbit HEV (FJ906895) HEV-A 56.0 54.9 59.9 51.6 50.1 56.4 27.6
Wild boar HEV (AB573435) HEV-A 57.3 56.2 60.4 54.8 49.7 56.2 33.6
Wild boar HEV (AB602441) HEV-A 56.8 55.7 59.6 54.5 50.3 56.5 31.9
Camel HEV (KJ496144) HEV-A 55.9 54.9 59.4 53.5 50.5 56.2 32.2
Camel HEV (KX387867) HEV-A 55.6 54.3 59.7 53.7 50.1 55.8 29.6
Rat HEV Vietnam-105 (JX120573) HEV-C 93.7 93.3 95.2 96.4 98.2 98.0 95.1
Rat HEV LA-B350 (KM516906) HEV-C 77.3 76.3 79.7 79.3 88.0 92.1 64.7
Ferret HEV (JN998606) HEV-C 68.7 67.5 71.1 64.2 74.8 78.7 45.9
Bat HEV (JQ001749) HEV-D 53.8 53.8 54.3 44.7 45.7 47.9 18.1
Avian HEV (AY535004) HEV-B 53.5 54.0 53.0 46.4 45.6 43.5 24.8

*HEV, hepatitis E virus; ORF, open reading frame.

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Page created: November 20, 2018
Page updated: November 20, 2018
Page reviewed: November 20, 2018
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