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Volume 26, Number 1—January 2020

High Pathogenicity of Nipah Virus from Pteropus lylei Fruit Bats, Cambodia

Maria Gaudino, Noémie Aurine, Claire Dumont, Julien Fouret, Marion Ferren, Cyrille Mathieu, Olivier Reynard, Viktor E. Volchkov, Catherine Legras-Lachuer, Marie-Claude Georges-Courbot, and Branka HorvatComments to Author 
Author affiliations: Centre International de Recherche en Infectiologie, CIRI, INSERM U1111, CNRS, UMR5308, Univ Lyon, University Claude Bernard Lyon 1, École Normale Supérieure de Lyon, Lyon, France (M. Gaudino, N. Aurine, C. Dumont, J. Fouret, M. Ferren, C. Mathieu, O. Reynard, V.E. Volchkov, M.-C. Georges-Courbot, B. Horvat); ViroScan 3D, Trévoux, France (J. Fouret, C. Legras-Lachuer); University Claude Bernard Lyon 1, LEM, UMR5557, CNRS, INRA, VetAgro Sup, Lyon (C. Legras-Lachuer); Unité de Biologie des Infections Virales Emergentes, Institut Pasteur, INSERM P4, Jean Mérieux, Lyon (M.-C. Georges-Courbot)

Main Article

Table 2

Pairwise comparison of NiV CSUR381, Cambodia, 2003, and other available NiVs, by NiV gene*

NiV (GenBank accession no.) NiV gene, % nucleotide identity/% homology of deduced amino acid†
Nipah/Malaysia/2010/Pvampyrus (FN869553.1) 98.3/99.2 96.3/94.9 98.9/99.4 98.4/98.7 97.1/98.5 98.0/99.3
Nipah/Malaysia/2000/human (NC002728.1) 97.9/98.7 95.9/94.1 98.5/99.1 98.1/98.9 97.1/98.5 98.1/99.4
Nipah/Bangladesh/2004/human (AY988601.1) 93.8/98.5 87.8/84.8 93.0/99.1 93.0/98.2 88.3/95.5 91.7/98.2
Nipah/Bangladesh/2008/human (JN808863.1) 93.9/98.7 87.6/84.4 93.0/99.1 93.3/98.5 88.1/95.5 91.8/98.4
Nipah/India/2007/human (FJ513078.1) 93.5/98.5 87.4/84.3 92.9/98.9 93.1/98.4 88.0/95.3 91.9/98.4
Nipah/India/2018/human (MH396625.1) 93.3/98.5 87.1/82.7 92.6/99.1 93.0/98.5 87.2/95.3 91.7/98.5
Nipah/Thailand/2010/Plylei (KT163252.1) 93.7/98.7
Nipah/Thailand/2010/Phypomelaneus (KT163247.1) 97.8/99.0

*F, fusion protein; G, attachment protein; L, polymerase; M, matrix protein; N, nucleoprotein; NiV, Nipah virus; P, phosphoprotein.
†Both calculated by using the p-distance method.

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Page created: December 18, 2019
Page updated: December 18, 2019
Page reviewed: December 18, 2019
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