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Volume 27, Number 1—January 2021
Research

Comparative Omics Analysis of Historic and Recent Isolates of Bordetella pertussis and Effects of Genome Rearrangements on Evolution

Ana Dienstbier, Fabian Amman, Denisa Petráčková, Daniel Štipl, Jan Čapek, Jana Zavadilová, Kateřina Fabiánová, Jakub Držmíšek, Dilip Kumar, Mark Wildung, Derek Pouchnik, and Branislav VečerekComments to Author 
Author affiliations: Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic (A. Dienstbier, D. Petráčková, D. Štipl, J. Čapek, J. Držmíšek, D. Kumar, B. Večerek); Institute for Theoretical Chemistry of the University of Vienna, Vienna, Austria (F. Amman); National Institute of Public Health, Prague (J. Zavadilová, K. Fabiánová); Washington State University, Pullman, Washington, USA (M. Wildung, D. Pouchnik)

Main Article

Figure 1

Maximum-parsimony, unrooted phylogenetic tree based on single-nucleotide polymorphism analysis of available genome sequences of Bordetella pertussis. Red dots indicate recent isolates from the Czech Republic. Year and country of isolation are color-coded. The 3 black dots indicate time span between 1999 and 2016. Asterisk (*) indicates association of historic strains from the Czech Republic with the ptxP1/ptxP2 clade. Scale bar indicates nucleotide substitutions per site.

Figure 1. Maximum-parsimony, unrooted phylogenetic tree based on single-nucleotide polymorphism analysis of available genome sequences of Bordetella pertussis. Red dots indicate recent isolates from the Czech Republic. Year and country of isolation are color-coded. The 3 black dots indicate time span between 1999 and 2016. Asterisk (*) indicates association of historic strains from the Czech Republic with the ptxP1/ptxP2 clade. Scale bar indicates nucleotide substitutions per site.

Main Article

Page created: September 01, 2020
Page updated: December 21, 2020
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