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Volume 27, Number 1—January 2021
Research

Territorywide Study of Early Coronavirus Disease Outbreak, Hong Kong, China

Kenneth Siu-Sing Leung, Timothy Ting-Leung Ng, Alan Ka-Lun Wu, Miranda Chong-Yee Yau, Hiu-Yin Lao, Ming-Pan Choi, Kingsley King-Gee Tam, Lam-Kwong Lee, Barry Kin-Chung Wong, Alex Yat Man Ho, Kam-Tong Yip, Kwok-Cheung Lung, Raymond Wai-To Liu, Eugene Yuk-Keung Tso, Wai-Shing Leung, Man-Chun Chan, Yuk-Yung Ng, Kit-Man Sin, Kitty Sau-Chun Fung, Sandy Ka-Yee Chau, Wing-Kin To, Tak-Lun Que, David Ho-Keung Shum, Shea Ping Yip, Wing Cheong Yam, and Gilman Kit-Hang SiuComments to Author 
Author affiliations: The University of Hong Kong, Hong Kong, China (K.S.-S. Leung, K.K.-G. Tam, W.C. Yam); The Hong Kong Polytechnic University, Hong Kong (T.T.-L. Ng, H.-Y. Lao, M.-P. Choi, L.-K. Lee, D.H.-K. Shum, S.P. Yip, G.K.-H. Siu); Pamela Youde Nethersole Eastern Hospital, Hong Kong (A.K.-L. Wu, M.C.-Y. Yau, K.-C. Lung); United Christian Hospital, Hong Kong (B.K.-C. Wong, E.Y.-K. Tso, K.S.-C. Fung, S.K.-Y. Chau); Princess Margaret Hospital, Hong Kong (A.Y.-M. Ho, W.-S. Leung, M.-C. Chan, W.-K. To); Tuen Mun Hospital, Hong Kong (K.-T. Yip, Y.-Y. Ng, K.-M. Sin, T.-L. Que); Ruttonjee Hospital, Hong Kong (R.W.-T. Liu)

Main Article

Figure 2

Maximum-likelihood phylogenetic tree of 50 coronavirus disease cases, Hong Kong, February 2020. The tree was rooted on the earliest published genome of severe acute respiratory syndrome coronavirus 2 (GenBank accession no. NC_045512.2). Bootstrap value was set at 1,000× and nodes with bootstrap value >50% were shown. Branch lengths were measured in number of substitutions per site. Samples are color-coded by epidemiologic link. Cases 84 and 102 were asymptomatic at the time of sample collection and are marked with asterisks. Each case is identified by case number used by the Centre of Health Protection, Department of Health, Hong Kong, and date of symptom onset. SSE, superspreading event.

Figure 2. Maximum-likelihood phylogenetic tree of 50 coronavirus disease cases, Hong Kong, February 2020. The tree was rooted on the earliest published genome of severe acute respiratory syndrome coronavirus 2 (GenBank accession no. NC_045512.2). Bootstrap value was set at 1,000× and nodes with bootstrap value >50% were shown. Branch lengths were measured in number of substitutions per site. Samples are color-coded by epidemiologic link. Cases 84 and 102 were asymptomatic at the time of sample collection and are marked with asterisks. Each case is identified by case number used by the Centre of Health Protection, Department of Health, Hong Kong, and date of symptom onset. SSE, superspreading event.

Main Article

Page created: November 23, 2020
Page updated: December 21, 2020
Page reviewed: December 21, 2020
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