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Volume 16, Number 4—April 2010
Dispatch

Evolution of Porcine Kobuvirus Infection, Hungary

Gábor ReuterComments to Author , Sándor Kecskeméti, and Péter Pankovics
Author affiliations: ÁNTSZ Regional Institute of State Public Health Service, Pécs, Hungary (G. Reuter, P. Pankovics); Central Agricultural Office, Debrecen, Hungary (S. Kecskeméti)

Main Article

Table 2

Natural interhost in vivo mutation changes in sequences of 2 porcine kobuvirus strains, Hungary*

Region Nucleotides
Amino acids
Length Difference % Difference Length Difference % Difference
5′ UTR 576 1 0.17
L 585 15 2.56 195 1 0.51
VP0 1,098 19 1.73 366 3 0.82
VP3 669 8 1.19 223 3 1.34
VP1 762 9 1.18 254 0 0
2A 408 6 1.47 136 2 1.47
2B 585 7 1.19 195 2 1.02
2C 1,005 23 2.28 335 5 1.49
3A 270 6 2.22 90 0 0
3B 102 2 1.96 34 0 0
3C 576 14 2.43 192 2 1.04
3D 1,407 16 1.14 469 2 0.42
3′ UTR 167 1 0.6
Nonstructural† 4,353 74 1.7 1,451 13 0.89
Structural‡ 2,529 36 1.42 843 6 0.71
Complete genome 8,210 127 1.54 2,489 20 0.80

*Strain length shown is for kobuvirus/swine/K-30-HUN/2008/Hungary (accession no. GQ249161) and is compared with prototype strain kobuvirus/swine/S-1-HUN/2007/Hungary (length not shown; accession no. EU787450), from samples collected from pigs on the same farm, November 2008 and February 2007 respectively. UTR, untranslated region; L, leader region.
†2A-3D.
‡VP0–VP1.

Main Article

Page created: December 27, 2010
Page updated: December 27, 2010
Page reviewed: December 27, 2010
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.
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