Volume 20, Number 1—January 2014
Research
Genetic Variation of Vibrio cholerae during Outbreaks, Bangladesh, 2010–2011
Table 1
Genotypes of Vibrio cholerae isolated from Chhatak, Bangladesh, October 2010–May 2011
Genotype | Source | No. isolates* (1/sample) | No. isolates† (9–10/sample) | Clonal complex |
---|---|---|---|---|
8-4-14-21-18 | Human | 7 | 1 | |
8-4-14-22-18 | Human | 1 | 1 | |
9-4-14-14-16 | Human | 8 | 1 | |
9-4-14-14-17 | Human | 1 | 1 | |
9-4-14-9-17 | Human | 1 | 1 | |
9-4-14-20-17 | Human | 2 | 1 | |
9-4-14-21-12 | Human | 11 | 1 | |
9-4-14-21-13 | Human | 1 | 1 | |
9-4-14-21-19 | Human | 1 | 1 | |
9-4-14-21-18 | Human | 5 | 4 | 1 |
9-4-14-22-12 | Human | 2 | 1 | |
9-4-14-22-16 | Human | 2 | 1 | |
9-4-14-23-16 | Human | 1 | 1 | 1 |
9-4-14-23-17 | Human | 1 | 3 | 1 |
9-4-14-23-18 | Human | 5 | 1 | |
9-4-14-23-19 | Human | 1 | 1 | |
9-4-14-25-16 | Human | 1 | 1 | |
9-4-14-25-17 | Human | 15 | 14 | 1 |
9-4-14-21-17‡ | Human and environment | 5 and 2 | 18 | 1 |
9-4-14-27-18 | Environment | 1 | 1 | |
8-4-14-21-11 | Environment | 1 | 1 | |
7-4-14-23-17 | Human | 5 | 1 | |
9-4-14-13-16 | Human | 1 | 1 | |
9-4-14-18-16 | Human | 9 | 1 | |
9-4-14-22-18 | Human | 2 | 1 | |
9-4-14-22-17 | Human | 1 | 1 | |
7-9-14-14-6 | Human | 1 | Singleton, Oct 13 | |
11-9-14-14-17 | Human | 2 | Singleton, Oct 21 | |
12-8-14-15-17 | Human | 1 | Singleton, Oct 11 | |
10-8-14-17-18 | Environment | 1 | Singleton, Nov 1 |
*Single isolates chosen from the 79 samples
†Multiple isolates from 6 patients
‡Designates the founder genotype defined by eBURST (http://eburst.mlst.net) as the genotype that differs from the largest number of genotypes at a single locus.