Volume 23, Number 12—December 2017
Research
Evolutionary Context of Non–Sorbitol-Fermenting Shiga Toxin–Producing Escherichia coli O55:H7
Table 2
Location of prophages in Shiga toxin–producing Escherichia coli O55:H7 isolate 122262 from outbreak in Dorset County, England, July 2014, and related Sakai reference prophage*
Prophage in 122262 | Location | Related Sakai phage | Identity, % |
---|---|---|---|
P1 | 298714–355267 | Sp8 | 96 |
P2 | 2728769–2738381 | NP | NA |
P3 | 2958215–2992979 | Sp3 | 98 |
P4 | 3119806–3151485 | NP | NA |
P5 | 3702030–3736837 | Sp5 | 99 |
P6 | 4031314–4075190 | NP | NA |
P7 | 4166735–4223146 | NP | NA |
P8 | 4361295–4432383 | Sp6 | 97 |
P9 | 4549353–4575262 | NP | NA |
P10 | 4662955–4712352 | NP | NA |
P11 | 4744636–4768829 | NP | NA |
P12 | 4868835–4901248 | NP | NA |
P13 | 5136256–5154117 | NP | NA |
P14 | 5221278–5261127 | Sp14 | 98 |
P15 | 5287889–5361495 | NP | NA |
Stx-encoding phage | 3607500–3655000 | NP | NA |
*NA, not applicable; NP, not present; Stx, Shiga toxin.